Fire Browse

A simple and elegant way to explore cancer data. Sitting above one of the deepest and most integratively characterized open cancer datasets in the world. Backed by a powerful computational infrastructure, application programming interface (API), graphical tools and online reports. With over 80K sample aliquots from 11,000+ cancer patients, spanning 38 unique disease cohorts.

Links

API Paths

Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Translate TCGA platform codes to full platform names. (GET) /Metadata/Platforms OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Translate TCGA platform codes to full platform names. (GET) /Metadata/Platforms OpenAPI
Given a TCGA barcode, return its short letter sample type code. (GET) /Metadata/SampleType/Barcode/{TCGA_Barcode} OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Translate TCGA platform codes to full platform names. (GET) /Metadata/Platforms OpenAPI
Given a TCGA barcode, return its short letter sample type code. (GET) /Metadata/SampleType/Barcode/{TCGA_Barcode} OpenAPI
Translate from numeric to symbolic TCGA sample codes. (GET) /Metadata/SampleType/Code/{code} OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Translate TCGA platform codes to full platform names. (GET) /Metadata/Platforms OpenAPI
Given a TCGA barcode, return its short letter sample type code. (GET) /Metadata/SampleType/Barcode/{TCGA_Barcode} OpenAPI
Translate from numeric to symbolic TCGA sample codes. (GET) /Metadata/SampleType/Code/{code} OpenAPI
Translate from symbolic to numeric TCGA sample codes. (GET) /Metadata/SampleType/ShortLetterCode/{short_letter_code} OpenAPI
Return all TCGA sample type codes, both numeric and symbolic. (GET) /Metadata/SampleTypes OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Translate TCGA platform codes to full platform names. (GET) /Metadata/Platforms OpenAPI
Given a TCGA barcode, return its short letter sample type code. (GET) /Metadata/SampleType/Barcode/{TCGA_Barcode} OpenAPI
Translate from numeric to symbolic TCGA sample codes. (GET) /Metadata/SampleType/Code/{code} OpenAPI
Translate from symbolic to numeric TCGA sample codes. (GET) /Metadata/SampleType/ShortLetterCode/{short_letter_code} OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Translate TCGA platform codes to full platform names. (GET) /Metadata/Platforms OpenAPI
Given a TCGA barcode, return its short letter sample type code. (GET) /Metadata/SampleType/Barcode/{TCGA_Barcode} OpenAPI
Translate from numeric to symbolic TCGA sample codes. (GET) /Metadata/SampleType/Code/{code} OpenAPI
Translate from symbolic to numeric TCGA sample codes. (GET) /Metadata/SampleType/ShortLetterCode/{short_letter_code} OpenAPI
Return all TCGA sample type codes, both numeric and symbolic. (GET) /Metadata/SampleTypes OpenAPI
Obtain identities of tissue source sites in TCGA. (GET) /Metadata/TSSites OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Translate TCGA platform codes to full platform names. (GET) /Metadata/Platforms OpenAPI
Given a TCGA barcode, return its short letter sample type code. (GET) /Metadata/SampleType/Barcode/{TCGA_Barcode} OpenAPI
Translate from numeric to symbolic TCGA sample codes. (GET) /Metadata/SampleType/Code/{code} OpenAPI
Translate from symbolic to numeric TCGA sample codes. (GET) /Metadata/SampleType/ShortLetterCode/{short_letter_code} OpenAPI
Return all TCGA sample type codes, both numeric and symbolic. (GET) /Metadata/SampleTypes OpenAPI
Obtain identities of tissue source sites in TCGA. (GET) /Metadata/TSSites OpenAPI
Retrieve TCGA CDEs verbatim, i.e. not normalized by Firehose. (GET) /Samples/Clinical OpenAPI
Retrieve CDEs normalized by Firehose and selected for analyses. (GET) /Samples/Clinical_FH OpenAPI
Retrieve mRNASeq data. (GET) /Samples/mRNASeq OpenAPI
Retrieve miRSeq data. (GET) /Samples/miRSeq OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Translate TCGA platform codes to full platform names. (GET) /Metadata/Platforms OpenAPI
Given a TCGA barcode, return its short letter sample type code. (GET) /Metadata/SampleType/Barcode/{TCGA_Barcode} OpenAPI
Translate from numeric to symbolic TCGA sample codes. (GET) /Metadata/SampleType/Code/{code} OpenAPI
Translate from symbolic to numeric TCGA sample codes. (GET) /Metadata/SampleType/ShortLetterCode/{short_letter_code} OpenAPI
Return all TCGA sample type codes, both numeric and symbolic. (GET) /Metadata/SampleTypes OpenAPI
Obtain identities of tissue source sites in TCGA. (GET) /Metadata/TSSites OpenAPI
Retrieve TCGA CDEs verbatim, i.e. not normalized by Firehose. (GET) /Samples/Clinical OpenAPI
Retrieve CDEs normalized by Firehose and selected for analyses. (GET) /Samples/Clinical_FH OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Translate TCGA platform codes to full platform names. (GET) /Metadata/Platforms OpenAPI
Given a TCGA barcode, return its short letter sample type code. (GET) /Metadata/SampleType/Barcode/{TCGA_Barcode} OpenAPI
Translate from numeric to symbolic TCGA sample codes. (GET) /Metadata/SampleType/Code/{code} OpenAPI
Translate from symbolic to numeric TCGA sample codes. (GET) /Metadata/SampleType/ShortLetterCode/{short_letter_code} OpenAPI
Return all TCGA sample type codes, both numeric and symbolic. (GET) /Metadata/SampleTypes OpenAPI
Obtain identities of tissue source sites in TCGA. (GET) /Metadata/TSSites OpenAPI
Retrieve TCGA CDEs verbatim, i.e. not normalized by Firehose. (GET) /Samples/Clinical OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Translate TCGA platform codes to full platform names. (GET) /Metadata/Platforms OpenAPI
Given a TCGA barcode, return its short letter sample type code. (GET) /Metadata/SampleType/Barcode/{TCGA_Barcode} OpenAPI
Translate from numeric to symbolic TCGA sample codes. (GET) /Metadata/SampleType/Code/{code} OpenAPI
Translate from symbolic to numeric TCGA sample codes. (GET) /Metadata/SampleType/ShortLetterCode/{short_letter_code} OpenAPI
Return all TCGA sample type codes, both numeric and symbolic. (GET) /Metadata/SampleTypes OpenAPI
Obtain identities of tissue source sites in TCGA. (GET) /Metadata/TSSites OpenAPI
Retrieve TCGA CDEs verbatim, i.e. not normalized by Firehose. (GET) /Samples/Clinical OpenAPI
Retrieve CDEs normalized by Firehose and selected for analyses. (GET) /Samples/Clinical_FH OpenAPI
Retrieve mRNASeq data. (GET) /Samples/mRNASeq OpenAPI
Retrieve miRSeq data. (GET) /Samples/miRSeq OpenAPI
Retrieve all data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/All OpenAPI
Retrieve Gistic2 significantly amplified genes results. (GET) /Analyses/CopyNumber/Genes/Amplified OpenAPI
Retrieve Gistic2 significantly deleted genes results. (GET) /Analyses/CopyNumber/Genes/Deleted OpenAPI
Retrieve focal data by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Focal OpenAPI
Retrieve all thresholded by genes Gistic2 results. (GET) /Analyses/CopyNumber/Genes/Thresholded OpenAPI
Retrieve aggregated analysis features table. (GET) /Analyses/FeatureTable OpenAPI
Retrieve MutSig final analysis MAF. (GET) /Analyses/Mutation/MAF OpenAPI
Retrieve Significantly Mutated Genes (SMG). (GET) /Analyses/Mutation/SMG OpenAPI
Retrieve links to summary reports from Firehose analysis runs. (GET) /Analyses/Reports OpenAPI
Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. (GET) /Analyses/mRNASeq/Quartiles OpenAPI
Retrieve standard data archives. (GET) /Archives/StandardData OpenAPI
Obtain identities of TCGA consortium member centers. (GET) /Metadata/Centers OpenAPI
Retrieve names of all TCGA clinical data elements (CDEs). (GET) /Metadata/ClinicalNames OpenAPI
Retrieve names of CDEs normalized by Firehose and selected for analyses. (GET) /Metadata/ClinicalNames_FH OpenAPI
Translate TCGA cohort abbreviations to full disease names. (GET) /Metadata/Cohorts OpenAPI
Retrieve sample counts. (GET) /Metadata/Counts OpenAPI
Retrieve datestamps of all GDAC Firehose standard data and analyses runs that have been ingested into FireBrowse. (GET) /Metadata/Dates OpenAPI
Simple way to discern whether API server is up and running (GET) /Metadata/HeartBeat OpenAPI
Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. (GET) /Metadata/MAFColNames OpenAPI
Retrieve list of all TCGA patients. (GET) /Metadata/Patients OpenAPI
Translate TCGA platform codes to full platform names. (GET) /Metadata/Platforms OpenAPI
Given a TCGA barcode, return its short letter sample type code. (GET) /Metadata/SampleType/Barcode/{TCGA_Barcode} OpenAPI
Translate from numeric to symbolic TCGA sample codes. (GET) /Metadata/SampleType/Code/{code} OpenAPI
Translate from symbolic to numeric TCGA sample codes. (GET) /Metadata/SampleType/ShortLetterCode/{short_letter_code} OpenAPI
Return all TCGA sample type codes, both numeric and symbolic. (GET) /Metadata/SampleTypes OpenAPI
Obtain identities of tissue source sites in TCGA. (GET) /Metadata/TSSites OpenAPI
Retrieve TCGA CDEs verbatim, i.e. not normalized by Firehose. (GET) /Samples/Clinical OpenAPI
Retrieve CDEs normalized by Firehose and selected for analyses. (GET) /Samples/Clinical_FH OpenAPI
Retrieve mRNASeq data. (GET) /Samples/mRNASeq OpenAPI

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